Čerba, Dubravka

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  • Čerba, Dubravka (8)

Author's Bibliography

Diversity Patterns and Assemblage Structure of Non-Biting Midges (Diptera: Chironomidae) in Urban Waterbodies

Popović, Nataša; Marinković, Nikola; Čerba, Dubravka; Raković, Maja; Đuknić, Jelena; Paunović, Momir

(Basel: MDPI, 2022)

TY  - JOUR
AU  - Popović, Nataša
AU  - Marinković, Nikola
AU  - Čerba, Dubravka
AU  - Raković, Maja
AU  - Đuknić, Jelena
AU  - Paunović, Momir
PY  - 2022
UR  - http://radar.ibiss.bg.ac.rs/handle/123456789/4915
AB  - Urban waters are often neglected in biodiversity research; nonetheless, the number of
aquatic microhabitats present in a city and the surrounding urban area is impressive. Twenty-two
waterbodies in the Belgrade functional urban area (FUA) were investigated for faunistic and diversity
patterns and to assess the effects of environmental factors on the differentiation of Chironomidae
assemblages. A total of 66 chironomid taxa within four subfamilies was identified. Water quality
at the studied sites, expressed by the water pollution index (WPI), varied significantly. K-means
clustering gave four homogenous groups of chironomid assemblages, which showed clear preferences
to specific habitat conditions and tolerance to anthropogenic pressures. These groups had high values
of alpha and beta diversity components. The main component of beta diversity was species turnover.
Waterbody type, water temperature, pH, nutrients and overall pollution were the most important
factors influencing the distribution and composition of chironomid assemblages, which revealed
clear preferences of each assemblage type to the category of waterbody type and tolerances to
environmental pressures.
PB  - Basel: MDPI
T2  - Diversity
T1  - Diversity Patterns and Assemblage Structure of Non-Biting Midges (Diptera: Chironomidae) in Urban Waterbodies
IS  - 3
VL  - 14
DO  - 10.3390/d14030187
SP  - 187
ER  - 
@article{
author = "Popović, Nataša and Marinković, Nikola and Čerba, Dubravka and Raković, Maja and Đuknić, Jelena and Paunović, Momir",
year = "2022",
abstract = "Urban waters are often neglected in biodiversity research; nonetheless, the number of
aquatic microhabitats present in a city and the surrounding urban area is impressive. Twenty-two
waterbodies in the Belgrade functional urban area (FUA) were investigated for faunistic and diversity
patterns and to assess the effects of environmental factors on the differentiation of Chironomidae
assemblages. A total of 66 chironomid taxa within four subfamilies was identified. Water quality
at the studied sites, expressed by the water pollution index (WPI), varied significantly. K-means
clustering gave four homogenous groups of chironomid assemblages, which showed clear preferences
to specific habitat conditions and tolerance to anthropogenic pressures. These groups had high values
of alpha and beta diversity components. The main component of beta diversity was species turnover.
Waterbody type, water temperature, pH, nutrients and overall pollution were the most important
factors influencing the distribution and composition of chironomid assemblages, which revealed
clear preferences of each assemblage type to the category of waterbody type and tolerances to
environmental pressures.",
publisher = "Basel: MDPI",
journal = "Diversity",
title = "Diversity Patterns and Assemblage Structure of Non-Biting Midges (Diptera: Chironomidae) in Urban Waterbodies",
number = "3",
volume = "14",
doi = "10.3390/d14030187",
pages = "187"
}
Popović, N., Marinković, N., Čerba, D., Raković, M., Đuknić, J.,& Paunović, M.. (2022). Diversity Patterns and Assemblage Structure of Non-Biting Midges (Diptera: Chironomidae) in Urban Waterbodies. in Diversity
Basel: MDPI., 14(3), 187.
https://doi.org/10.3390/d14030187
Popović N, Marinković N, Čerba D, Raković M, Đuknić J, Paunović M. Diversity Patterns and Assemblage Structure of Non-Biting Midges (Diptera: Chironomidae) in Urban Waterbodies. in Diversity. 2022;14(3):187.
doi:10.3390/d14030187 .
Popović, Nataša, Marinković, Nikola, Čerba, Dubravka, Raković, Maja, Đuknić, Jelena, Paunović, Momir, "Diversity Patterns and Assemblage Structure of Non-Biting Midges (Diptera: Chironomidae) in Urban Waterbodies" in Diversity, 14, no. 3 (2022):187,
https://doi.org/10.3390/d14030187 . .
1
6
3

The Danube River Basin

Sommerwerk, Nike; Bloesch, Jürg; Baumgartner, Christian; Bittl, Thomas; Čerba, Dubravka; Csányi, Béla; Davideanu, Grigore; Dokulil, Martin; Frank, Georg; Grecu, Iulia; Hein, Thomas; Kováč, Vladimír; Nichersu, Iulian; Mikuska, Tibor; Pall, Karin; Paunović, Momir; Postolache, Carmen; Raković, Maja; Sandu, Cristina; Schneider-Jacoby, Martin; Stefke, Katharina; Tockner, Klement; Toderaş, Ion; Ungureanu, Laurenţia

(Elsevier, 2022)

TY  - CHAP
AU  - Sommerwerk, Nike
AU  - Bloesch, Jürg
AU  - Baumgartner, Christian
AU  - Bittl, Thomas
AU  - Čerba, Dubravka
AU  - Csányi, Béla
AU  - Davideanu, Grigore
AU  - Dokulil, Martin
AU  - Frank, Georg
AU  - Grecu, Iulia
AU  - Hein, Thomas
AU  - Kováč, Vladimír
AU  - Nichersu, Iulian
AU  - Mikuska, Tibor
AU  - Pall, Karin
AU  - Paunović, Momir
AU  - Postolache, Carmen
AU  - Raković, Maja
AU  - Sandu, Cristina
AU  - Schneider-Jacoby, Martin
AU  - Stefke, Katharina
AU  - Tockner, Klement
AU  - Toderaş, Ion
AU  - Ungureanu, Laurenţia
PY  - 2022
UR  - http://radar.ibiss.bg.ac.rs/handle/123456789/4914
AB  - The Danube is an outstanding river: It links more countries than any other river in the world. The Danube River Basin (DRB) collects waters from the territories of 19 European nations and it forms the international boundaries for eight of these. The river's largely eastward course has served as a corridor for both migration and trade, and a boundary between east and west strongly guarded for thousands of years. The multi-cultural setting makes transboundary issues extremely challenging. In this chapter we characterize and synthesize the natural features of the main river, its 10 major tributaries and the Danube Delta. We present extensive information and data on biodiversity, climate, topography and hydrology. We also describe in detail stressors like land use, sediment regime and (hydro-)morphology alteration, pollution, non-native species introduction or fragmentation by dams and also socio-economic properties. We reflect about their major, adverse consequences for the functioning of river ecosystems in the entire basin. We also introduce river basin authorities such as the International Commission for the Protection of the Danube River (ICPDR) identified as important and useful platforms for dialogue and debate of appropriate goals and their implementation, involvement of stakeholders and the public, but also as "translators" of scientific results.

Additionally, the chapter contains maps, photographs and data tables that allow in depth analyses of and comparison between physical and biological features of the Danube River Basin and other rivers in Europe.
PB  - Elsevier
T2  - Rivers of Europe (Second Edition)
T1  - The Danube River Basin
DO  - 10.1016/B978-0-08-102612-0.00003-1
SP  - 81
EP  - 180
ER  - 
@inbook{
author = "Sommerwerk, Nike and Bloesch, Jürg and Baumgartner, Christian and Bittl, Thomas and Čerba, Dubravka and Csányi, Béla and Davideanu, Grigore and Dokulil, Martin and Frank, Georg and Grecu, Iulia and Hein, Thomas and Kováč, Vladimír and Nichersu, Iulian and Mikuska, Tibor and Pall, Karin and Paunović, Momir and Postolache, Carmen and Raković, Maja and Sandu, Cristina and Schneider-Jacoby, Martin and Stefke, Katharina and Tockner, Klement and Toderaş, Ion and Ungureanu, Laurenţia",
year = "2022",
abstract = "The Danube is an outstanding river: It links more countries than any other river in the world. The Danube River Basin (DRB) collects waters from the territories of 19 European nations and it forms the international boundaries for eight of these. The river's largely eastward course has served as a corridor for both migration and trade, and a boundary between east and west strongly guarded for thousands of years. The multi-cultural setting makes transboundary issues extremely challenging. In this chapter we characterize and synthesize the natural features of the main river, its 10 major tributaries and the Danube Delta. We present extensive information and data on biodiversity, climate, topography and hydrology. We also describe in detail stressors like land use, sediment regime and (hydro-)morphology alteration, pollution, non-native species introduction or fragmentation by dams and also socio-economic properties. We reflect about their major, adverse consequences for the functioning of river ecosystems in the entire basin. We also introduce river basin authorities such as the International Commission for the Protection of the Danube River (ICPDR) identified as important and useful platforms for dialogue and debate of appropriate goals and their implementation, involvement of stakeholders and the public, but also as "translators" of scientific results.

Additionally, the chapter contains maps, photographs and data tables that allow in depth analyses of and comparison between physical and biological features of the Danube River Basin and other rivers in Europe.",
publisher = "Elsevier",
journal = "Rivers of Europe (Second Edition)",
booktitle = "The Danube River Basin",
doi = "10.1016/B978-0-08-102612-0.00003-1",
pages = "81-180"
}
Sommerwerk, N., Bloesch, J., Baumgartner, C., Bittl, T., Čerba, D., Csányi, B., Davideanu, G., Dokulil, M., Frank, G., Grecu, I., Hein, T., Kováč, V., Nichersu, I., Mikuska, T., Pall, K., Paunović, M., Postolache, C., Raković, M., Sandu, C., Schneider-Jacoby, M., Stefke, K., Tockner, K., Toderaş, I.,& Ungureanu, L.. (2022). The Danube River Basin. in Rivers of Europe (Second Edition)
Elsevier., 81-180.
https://doi.org/10.1016/B978-0-08-102612-0.00003-1
Sommerwerk N, Bloesch J, Baumgartner C, Bittl T, Čerba D, Csányi B, Davideanu G, Dokulil M, Frank G, Grecu I, Hein T, Kováč V, Nichersu I, Mikuska T, Pall K, Paunović M, Postolache C, Raković M, Sandu C, Schneider-Jacoby M, Stefke K, Tockner K, Toderaş I, Ungureanu L. The Danube River Basin. in Rivers of Europe (Second Edition). 2022;:81-180.
doi:10.1016/B978-0-08-102612-0.00003-1 .
Sommerwerk, Nike, Bloesch, Jürg, Baumgartner, Christian, Bittl, Thomas, Čerba, Dubravka, Csányi, Béla, Davideanu, Grigore, Dokulil, Martin, Frank, Georg, Grecu, Iulia, Hein, Thomas, Kováč, Vladimír, Nichersu, Iulian, Mikuska, Tibor, Pall, Karin, Paunović, Momir, Postolache, Carmen, Raković, Maja, Sandu, Cristina, Schneider-Jacoby, Martin, Stefke, Katharina, Tockner, Klement, Toderaş, Ion, Ungureanu, Laurenţia, "The Danube River Basin" in Rivers of Europe (Second Edition) (2022):81-180,
https://doi.org/10.1016/B978-0-08-102612-0.00003-1 . .
10

Non-biting midges (Chironomidae) from artificial water bodies in Belgrade sub-urban area

Popović, Nataša; Čerba, Dubravka; Raković, Maja; Tomović, Jelena; Atanacković, Ana; Marinković, Nikola; Ilić, Marija; Anđus, Stefan; Đuknić, Jelena; Čanak Atlagić, Jelena; Smiljanić, Petar; Paunović, Momir

(Banská Bystrica: Faculty of Natural Sciences, Matej Bel University, 2019)

TY  - CONF
AU  - Popović, Nataša
AU  - Čerba, Dubravka
AU  - Raković, Maja
AU  - Tomović, Jelena
AU  - Atanacković, Ana
AU  - Marinković, Nikola
AU  - Ilić, Marija
AU  - Anđus, Stefan
AU  - Đuknić, Jelena
AU  - Čanak Atlagić, Jelena
AU  - Smiljanić, Petar
AU  - Paunović, Momir
PY  - 2019
UR  - http://radar.ibiss.bg.ac.rs/handle/123456789/5684
AB  - Water bodies in Belgrade sub-urban area are under considerable anthropogenic pressure. Rivers
and channels discussed in this study pass through industrial zones, agricultural and urban areas,
and play an important role in draining atmospheric water and wastewater. Reservoirs in
Belgrade vicinity are also under diverse anthropogenic influence. Macroinvertebrate samples
were collected in June and September 2018 from 21 water bodies (9 rivers, 8 canals, and 4
reservoirs), following MHS sampling procedure. Chironomids were dominant in all samples
and as such, they were analyzed independently. A total of 69 chironomid taxa (48 – rivers, 29
– reservoirs and 25 – channels) were recorded, within 4 subfamilies (Prodiamesinae,
Orthocladinae, Tanypodinae and Chironominae). The most abundant species altogether was
Chironomus riparius, with highest abundance in Barička reka. In reservoirs, the most abundant
non-biting midges belong to genus Procladius and Ablabesmyia monilis agg. while in the
channels the most abundant were Parachironomus arcuatus agg. and Cricotopus sylvestris
group. High dominance of chironomids in macroinvertebrate communities, as well as the
chironomid community structure itself, suggest that they could be efficiently used for
assessment of anthropogenic pressure in sub-urban areas.
PB  - Banská Bystrica: Faculty of Natural Sciences, Matej Bel University
C3  - Conference Abstracts: The 10th Central European Dipterological Conference; 2019 Sep 23-25; Kežmarské Žľaby, Slovakia
T1  - Non-biting midges (Chironomidae) from artificial water bodies in Belgrade sub-urban area
SP  - 35
UR  - https://hdl.handle.net/21.15107/rcub_ibiss_5684
ER  - 
@conference{
author = "Popović, Nataša and Čerba, Dubravka and Raković, Maja and Tomović, Jelena and Atanacković, Ana and Marinković, Nikola and Ilić, Marija and Anđus, Stefan and Đuknić, Jelena and Čanak Atlagić, Jelena and Smiljanić, Petar and Paunović, Momir",
year = "2019",
abstract = "Water bodies in Belgrade sub-urban area are under considerable anthropogenic pressure. Rivers
and channels discussed in this study pass through industrial zones, agricultural and urban areas,
and play an important role in draining atmospheric water and wastewater. Reservoirs in
Belgrade vicinity are also under diverse anthropogenic influence. Macroinvertebrate samples
were collected in June and September 2018 from 21 water bodies (9 rivers, 8 canals, and 4
reservoirs), following MHS sampling procedure. Chironomids were dominant in all samples
and as such, they were analyzed independently. A total of 69 chironomid taxa (48 – rivers, 29
– reservoirs and 25 – channels) were recorded, within 4 subfamilies (Prodiamesinae,
Orthocladinae, Tanypodinae and Chironominae). The most abundant species altogether was
Chironomus riparius, with highest abundance in Barička reka. In reservoirs, the most abundant
non-biting midges belong to genus Procladius and Ablabesmyia monilis agg. while in the
channels the most abundant were Parachironomus arcuatus agg. and Cricotopus sylvestris
group. High dominance of chironomids in macroinvertebrate communities, as well as the
chironomid community structure itself, suggest that they could be efficiently used for
assessment of anthropogenic pressure in sub-urban areas.",
publisher = "Banská Bystrica: Faculty of Natural Sciences, Matej Bel University",
journal = "Conference Abstracts: The 10th Central European Dipterological Conference; 2019 Sep 23-25; Kežmarské Žľaby, Slovakia",
title = "Non-biting midges (Chironomidae) from artificial water bodies in Belgrade sub-urban area",
pages = "35",
url = "https://hdl.handle.net/21.15107/rcub_ibiss_5684"
}
Popović, N., Čerba, D., Raković, M., Tomović, J., Atanacković, A., Marinković, N., Ilić, M., Anđus, S., Đuknić, J., Čanak Atlagić, J., Smiljanić, P.,& Paunović, M.. (2019). Non-biting midges (Chironomidae) from artificial water bodies in Belgrade sub-urban area. in Conference Abstracts: The 10th Central European Dipterological Conference; 2019 Sep 23-25; Kežmarské Žľaby, Slovakia
Banská Bystrica: Faculty of Natural Sciences, Matej Bel University., 35.
https://hdl.handle.net/21.15107/rcub_ibiss_5684
Popović N, Čerba D, Raković M, Tomović J, Atanacković A, Marinković N, Ilić M, Anđus S, Đuknić J, Čanak Atlagić J, Smiljanić P, Paunović M. Non-biting midges (Chironomidae) from artificial water bodies in Belgrade sub-urban area. in Conference Abstracts: The 10th Central European Dipterological Conference; 2019 Sep 23-25; Kežmarské Žľaby, Slovakia. 2019;:35.
https://hdl.handle.net/21.15107/rcub_ibiss_5684 .
Popović, Nataša, Čerba, Dubravka, Raković, Maja, Tomović, Jelena, Atanacković, Ana, Marinković, Nikola, Ilić, Marija, Anđus, Stefan, Đuknić, Jelena, Čanak Atlagić, Jelena, Smiljanić, Petar, Paunović, Momir, "Non-biting midges (Chironomidae) from artificial water bodies in Belgrade sub-urban area" in Conference Abstracts: The 10th Central European Dipterological Conference; 2019 Sep 23-25; Kežmarské Žľaby, Slovakia (2019):35,
https://hdl.handle.net/21.15107/rcub_ibiss_5684 .

Phylogeography of Simulium Subgenus Wilhelmia (Diptera: Simuliidae)-Insights From Balkan Populations.

Đuknić, Jelena; Jovanović, Vladimir; Popović, Nataša; Živić, Ivana; Raković, Maja; Čerba, Dubravka; Paunović, Momir

(2019)

TY  - JOUR
AU  - Đuknić, Jelena
AU  - Jovanović, Vladimir
AU  - Popović, Nataša
AU  - Živić, Ivana
AU  - Raković, Maja
AU  - Čerba, Dubravka
AU  - Paunović, Momir
PY  - 2019
UR  - https://academic.oup.com/jme/article/56/4/967/5435788
UR  - http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=PMC6595531
UR  - https://radar.ibiss.bg.ac.rs/handle/123456789/3439
AB  - Many morphologically similar species of the simuliid (Diptera: Simuliidae) subgenus Wilhelmia, Enderlein are difficult to distinguish. Thus, the revision of the subgenus using various morphological, cytogenetic, and genetic analyses has been attempted. Neglected until now, the Balkan Peninsula, a crossroad between Europe and Anatolia, provides insight which could resolve problematic interrelationships of the taxa within this subgenus. To uncover the status and relations within the subgenus Wilhelmia, mtDNA was extracted from 47 individuals of six morphospecies: Simulium balcanicum (Enderlein, 1924), Simulium turgaicum Rubtsov, 1940, Simulium lineatum (Meigen, 1804), Simulium pseudequinum Séguy, 1921, Simulium equinum (Linnaeus, 1758), and Simulium paraequinum Puri, 1933 from 21 sites throughout the Balkan Peninsula. Phylogenetic analysis of the Wilhelmia species using mitochondrial DNA barcoding (COI) gene showed two major branches, the lineatum branch, which includes the lineages sergenti, paraequinum, and lineatum, and the equinum branch. In the equinum branch, the mtDNA sequences formed six clades, with high genetic distances, suggesting the existence of different species. Historically, the clades of the equinum branch appeared at numerous islands, perhaps as a result of allopatric speciation. The paraequinum lineage (lineatum branch) is composed of two species. However, six clades of the lineatum lineage overlapped with intra- and interspecific genetic distances. Our results revealed that the species S. balcanicum, S. pseudequinum B, and S. equinum were omnipresent in the Balkans. The results point to not only the fair diversity of Wilhelmia species in the Balkans, but also indicate that most Wilhelmia species live in sympatry.
T2  - Journal of Medical Entomology
T1  - Phylogeography of Simulium Subgenus Wilhelmia (Diptera: Simuliidae)-Insights From Balkan Populations.
IS  - 4
VL  - 56
DO  - 10.1093/jme/tjz034
SP  - 967
EP  - 978
ER  - 
@article{
author = "Đuknić, Jelena and Jovanović, Vladimir and Popović, Nataša and Živić, Ivana and Raković, Maja and Čerba, Dubravka and Paunović, Momir",
year = "2019",
abstract = "Many morphologically similar species of the simuliid (Diptera: Simuliidae) subgenus Wilhelmia, Enderlein are difficult to distinguish. Thus, the revision of the subgenus using various morphological, cytogenetic, and genetic analyses has been attempted. Neglected until now, the Balkan Peninsula, a crossroad between Europe and Anatolia, provides insight which could resolve problematic interrelationships of the taxa within this subgenus. To uncover the status and relations within the subgenus Wilhelmia, mtDNA was extracted from 47 individuals of six morphospecies: Simulium balcanicum (Enderlein, 1924), Simulium turgaicum Rubtsov, 1940, Simulium lineatum (Meigen, 1804), Simulium pseudequinum Séguy, 1921, Simulium equinum (Linnaeus, 1758), and Simulium paraequinum Puri, 1933 from 21 sites throughout the Balkan Peninsula. Phylogenetic analysis of the Wilhelmia species using mitochondrial DNA barcoding (COI) gene showed two major branches, the lineatum branch, which includes the lineages sergenti, paraequinum, and lineatum, and the equinum branch. In the equinum branch, the mtDNA sequences formed six clades, with high genetic distances, suggesting the existence of different species. Historically, the clades of the equinum branch appeared at numerous islands, perhaps as a result of allopatric speciation. The paraequinum lineage (lineatum branch) is composed of two species. However, six clades of the lineatum lineage overlapped with intra- and interspecific genetic distances. Our results revealed that the species S. balcanicum, S. pseudequinum B, and S. equinum were omnipresent in the Balkans. The results point to not only the fair diversity of Wilhelmia species in the Balkans, but also indicate that most Wilhelmia species live in sympatry.",
journal = "Journal of Medical Entomology",
title = "Phylogeography of Simulium Subgenus Wilhelmia (Diptera: Simuliidae)-Insights From Balkan Populations.",
number = "4",
volume = "56",
doi = "10.1093/jme/tjz034",
pages = "967-978"
}
Đuknić, J., Jovanović, V., Popović, N., Živić, I., Raković, M., Čerba, D.,& Paunović, M.. (2019). Phylogeography of Simulium Subgenus Wilhelmia (Diptera: Simuliidae)-Insights From Balkan Populations.. in Journal of Medical Entomology, 56(4), 967-978.
https://doi.org/10.1093/jme/tjz034
Đuknić J, Jovanović V, Popović N, Živić I, Raković M, Čerba D, Paunović M. Phylogeography of Simulium Subgenus Wilhelmia (Diptera: Simuliidae)-Insights From Balkan Populations.. in Journal of Medical Entomology. 2019;56(4):967-978.
doi:10.1093/jme/tjz034 .
Đuknić, Jelena, Jovanović, Vladimir, Popović, Nataša, Živić, Ivana, Raković, Maja, Čerba, Dubravka, Paunović, Momir, "Phylogeography of Simulium Subgenus Wilhelmia (Diptera: Simuliidae)-Insights From Balkan Populations." in Journal of Medical Entomology, 56, no. 4 (2019):967-978,
https://doi.org/10.1093/jme/tjz034 . .
1
8
4
10

The potential of chironomid larvae-based metrics in the bioassessment of non-wadeable rivers

Milošević, Đurađ; Mančev, Dejan; Čerba, Dubravka; Stojković Piperac, Milica; Popović, Nataša; Atanacković, Ana; Đuknić, Jelena; Simić, Vladica; Paunović, Momir

(2018)

TY  - JOUR
AU  - Milošević, Đurađ
AU  - Mančev, Dejan
AU  - Čerba, Dubravka
AU  - Stojković Piperac, Milica
AU  - Popović, Nataša
AU  - Atanacković, Ana
AU  - Đuknić, Jelena
AU  - Simić, Vladica
AU  - Paunović, Momir
PY  - 2018
UR  - http://linkinghub.elsevier.com/retrieve/pii/S0048969717329807
UR  - https://radar.ibiss.bg.ac.rs/handle/123456789/2906
AB  - The chironomid community in non-wadeable lotic systems was tested as a source of information in the construction of biological metrics which could be used into the bioassessment protocols of large rivers. In order to achieve this, we simultaneously patterned the chironomid community structure and environmental factors along the catchment of the Danube and Sava River. The Self organizing map (SOM) recognized and visualized three different structural types of chironomid community for different environmental properties, described by means of 7 significant abiotic factors (a multi-stressor gradient). Indicator species analysis revealed that the chironomid taxa most responsible for structural changes significantly varied in their abundance and frequency along the established environmental gradients. Out of 40 biological metrics based on the chironomid community, the multilayer perceptron (MLP), an supervised type of artificial neural network, derived 5 models in which the abundance of Paratrichocladius rufiventis, Orthocladiinae, Cricotopus spp., Cricotopus triannulatus agg. and Cricotopus/Orthocladius ratio achieved a significant relationship (the r Pearson's linear correlation coefficient > 0.7) with the multi stressor environment. The sensitivity analysis “partial derivatives” (PaD) method showed that all 5 biological metrics within the multi-stressor gradient were mostly influenced by dissolved organic carbon (DOC). Despite short and monotonous environmental gradients and the absence of reference conditions, the chironomid community structure and biological metrics predictably changed along the multistress range, showing a great potential for the bioassessment of large rivers.
T2  - Science of The Total Environment
T2  - Science of The Total Environment
T1  - The potential of chironomid larvae-based metrics in the bioassessment of non-wadeable rivers
VL  - 616-617
DO  - 10.1016/j.scitotenv.2017.10.262
SP  - 472
EP  - 479
ER  - 
@article{
author = "Milošević, Đurađ and Mančev, Dejan and Čerba, Dubravka and Stojković Piperac, Milica and Popović, Nataša and Atanacković, Ana and Đuknić, Jelena and Simić, Vladica and Paunović, Momir",
year = "2018",
abstract = "The chironomid community in non-wadeable lotic systems was tested as a source of information in the construction of biological metrics which could be used into the bioassessment protocols of large rivers. In order to achieve this, we simultaneously patterned the chironomid community structure and environmental factors along the catchment of the Danube and Sava River. The Self organizing map (SOM) recognized and visualized three different structural types of chironomid community for different environmental properties, described by means of 7 significant abiotic factors (a multi-stressor gradient). Indicator species analysis revealed that the chironomid taxa most responsible for structural changes significantly varied in their abundance and frequency along the established environmental gradients. Out of 40 biological metrics based on the chironomid community, the multilayer perceptron (MLP), an supervised type of artificial neural network, derived 5 models in which the abundance of Paratrichocladius rufiventis, Orthocladiinae, Cricotopus spp., Cricotopus triannulatus agg. and Cricotopus/Orthocladius ratio achieved a significant relationship (the r Pearson's linear correlation coefficient > 0.7) with the multi stressor environment. The sensitivity analysis “partial derivatives” (PaD) method showed that all 5 biological metrics within the multi-stressor gradient were mostly influenced by dissolved organic carbon (DOC). Despite short and monotonous environmental gradients and the absence of reference conditions, the chironomid community structure and biological metrics predictably changed along the multistress range, showing a great potential for the bioassessment of large rivers.",
journal = "Science of The Total Environment, Science of The Total Environment",
title = "The potential of chironomid larvae-based metrics in the bioassessment of non-wadeable rivers",
volume = "616-617",
doi = "10.1016/j.scitotenv.2017.10.262",
pages = "472-479"
}
Milošević, Đ., Mančev, D., Čerba, D., Stojković Piperac, M., Popović, N., Atanacković, A., Đuknić, J., Simić, V.,& Paunović, M.. (2018). The potential of chironomid larvae-based metrics in the bioassessment of non-wadeable rivers. in Science of The Total Environment, 616-617, 472-479.
https://doi.org/10.1016/j.scitotenv.2017.10.262
Milošević Đ, Mančev D, Čerba D, Stojković Piperac M, Popović N, Atanacković A, Đuknić J, Simić V, Paunović M. The potential of chironomid larvae-based metrics in the bioassessment of non-wadeable rivers. in Science of The Total Environment. 2018;616-617:472-479.
doi:10.1016/j.scitotenv.2017.10.262 .
Milošević, Đurađ, Mančev, Dejan, Čerba, Dubravka, Stojković Piperac, Milica, Popović, Nataša, Atanacković, Ana, Đuknić, Jelena, Simić, Vladica, Paunović, Momir, "The potential of chironomid larvae-based metrics in the bioassessment of non-wadeable rivers" in Science of The Total Environment, 616-617 (2018):472-479,
https://doi.org/10.1016/j.scitotenv.2017.10.262 . .
1
21
15
23

Pattering the variability of chironomid-based metrics: the potential in the bioassessment of non-wadeable rivers

Milošević, Đurađ; Čerba, Dubravka; Popović, Nataša; Atanacković, Ana; Simić, Vladica; Paunović, Momir

(Trento: Autonomous Province of Trento, 2017)

TY  - CONF
AU  - Milošević, Đurađ
AU  - Čerba, Dubravka
AU  - Popović, Nataša
AU  - Atanacković, Ana
AU  - Simić, Vladica
AU  - Paunović, Momir
PY  - 2017
UR  - http://radar.ibiss.bg.ac.rs/handle/123456789/5225
AB  - Multimetric indices based on the aquatic macroinvertebrates are used in many bioassessment programs of freshwater ecosystems worldwide, simplifying complex biological data, but keeping a sufficient amount of information regarding the ecosystem health. Majority of them do not rely on data of the chironomid community due to the complicated identification and great natural variability which they show along the longitudinal gradient. In addition, all these routine monitoring programs are defined for smaller streams but not for large, non-wadeable rivers. Thus, we conducted the survey on two large rivers, the Danube and Sava River, forming a network of 96 sampling sites. The main goal of the study was to model the variability of chironomid-based metrics on the spatial gradients, and the environmental gradients which indicate different types of pollution. To realize this, macroinvertebrates, including Chironomidae larvae, were sampled applying multihabitat approach and simultaneously 16 environmental parameters were measured. Chironomid community structure was patterned using the Self-organizing map (SOM). This multivariate visualization technique constructed two dimensional neural networks where all sampling sites were ordinated and clustered into the three groups of neurons. Passively, not influencing previous ordination, we introduced 15 biotic metrics based on proportion of sensitive and tolerant chironomid taxa, and 17 environmental parameters, into the SOM. Component planes as an output of SOM analysis present a variability pattern for each passive parameter distributed on the SOM network, and a clearly formed gradient indicates a high influence of the parameter on the community pattern. In this study, natural variability (distance to source), conductivity, water elements from natural (nitrates, dissolved oxygen) and anthropogenic sources (orthophosphate and ammonium) and heavy metal pollution (Zn, Cu, As and Cd), formed clear gradients, indicating their important contribution to the chironomid community pattern. This was confirmed by the Kruskal–Wallis test, since the values of visualized parameters significantly differed (P<0.01) between groups of neurons obtained by SOM. The same analysis revealed 6 biotic metrics which concordantly changed together with significant environmental parameters on the SOM network. The variability of chironomid community was driven by longitudinal gradient and multiple stressors. The proportion of sensitive taxa regularly alternated along longitudinal gradient and became dominant in the community, indicating particular complex of stressors. Chironomid-based metrics showed promising variability pattern since they predictably changed along the both natural and stressors gradients. After the scoring system is established, this type of metrics could be included in the routine monitoring programs and provide useful information regarding the ecosystem health.
PB  - Trento: Autonomous Province of Trento
C3  - Abstract book of 20th International Symposium on Chironomidae: CHIROITA 2017; 2017 Jul 2-8; Trento, Italy
T1  - Pattering the variability of chironomid-based metrics: the potential in the bioassessment of non-wadeable rivers
SP  - 42
EP  - 42
UR  - https://hdl.handle.net/21.15107/rcub_ibiss_5225
ER  - 
@conference{
author = "Milošević, Đurađ and Čerba, Dubravka and Popović, Nataša and Atanacković, Ana and Simić, Vladica and Paunović, Momir",
year = "2017",
abstract = "Multimetric indices based on the aquatic macroinvertebrates are used in many bioassessment programs of freshwater ecosystems worldwide, simplifying complex biological data, but keeping a sufficient amount of information regarding the ecosystem health. Majority of them do not rely on data of the chironomid community due to the complicated identification and great natural variability which they show along the longitudinal gradient. In addition, all these routine monitoring programs are defined for smaller streams but not for large, non-wadeable rivers. Thus, we conducted the survey on two large rivers, the Danube and Sava River, forming a network of 96 sampling sites. The main goal of the study was to model the variability of chironomid-based metrics on the spatial gradients, and the environmental gradients which indicate different types of pollution. To realize this, macroinvertebrates, including Chironomidae larvae, were sampled applying multihabitat approach and simultaneously 16 environmental parameters were measured. Chironomid community structure was patterned using the Self-organizing map (SOM). This multivariate visualization technique constructed two dimensional neural networks where all sampling sites were ordinated and clustered into the three groups of neurons. Passively, not influencing previous ordination, we introduced 15 biotic metrics based on proportion of sensitive and tolerant chironomid taxa, and 17 environmental parameters, into the SOM. Component planes as an output of SOM analysis present a variability pattern for each passive parameter distributed on the SOM network, and a clearly formed gradient indicates a high influence of the parameter on the community pattern. In this study, natural variability (distance to source), conductivity, water elements from natural (nitrates, dissolved oxygen) and anthropogenic sources (orthophosphate and ammonium) and heavy metal pollution (Zn, Cu, As and Cd), formed clear gradients, indicating their important contribution to the chironomid community pattern. This was confirmed by the Kruskal–Wallis test, since the values of visualized parameters significantly differed (P<0.01) between groups of neurons obtained by SOM. The same analysis revealed 6 biotic metrics which concordantly changed together with significant environmental parameters on the SOM network. The variability of chironomid community was driven by longitudinal gradient and multiple stressors. The proportion of sensitive taxa regularly alternated along longitudinal gradient and became dominant in the community, indicating particular complex of stressors. Chironomid-based metrics showed promising variability pattern since they predictably changed along the both natural and stressors gradients. After the scoring system is established, this type of metrics could be included in the routine monitoring programs and provide useful information regarding the ecosystem health.",
publisher = "Trento: Autonomous Province of Trento",
journal = "Abstract book of 20th International Symposium on Chironomidae: CHIROITA 2017; 2017 Jul 2-8; Trento, Italy",
title = "Pattering the variability of chironomid-based metrics: the potential in the bioassessment of non-wadeable rivers",
pages = "42-42",
url = "https://hdl.handle.net/21.15107/rcub_ibiss_5225"
}
Milošević, Đ., Čerba, D., Popović, N., Atanacković, A., Simić, V.,& Paunović, M.. (2017). Pattering the variability of chironomid-based metrics: the potential in the bioassessment of non-wadeable rivers. in Abstract book of 20th International Symposium on Chironomidae: CHIROITA 2017; 2017 Jul 2-8; Trento, Italy
Trento: Autonomous Province of Trento., 42-42.
https://hdl.handle.net/21.15107/rcub_ibiss_5225
Milošević Đ, Čerba D, Popović N, Atanacković A, Simić V, Paunović M. Pattering the variability of chironomid-based metrics: the potential in the bioassessment of non-wadeable rivers. in Abstract book of 20th International Symposium on Chironomidae: CHIROITA 2017; 2017 Jul 2-8; Trento, Italy. 2017;:42-42.
https://hdl.handle.net/21.15107/rcub_ibiss_5225 .
Milošević, Đurađ, Čerba, Dubravka, Popović, Nataša, Atanacković, Ana, Simić, Vladica, Paunović, Momir, "Pattering the variability of chironomid-based metrics: the potential in the bioassessment of non-wadeable rivers" in Abstract book of 20th International Symposium on Chironomidae: CHIROITA 2017; 2017 Jul 2-8; Trento, Italy (2017):42-42,
https://hdl.handle.net/21.15107/rcub_ibiss_5225 .

Community concordance in lotic ecosystems: How to establish unbiased congruence between macroinvertebrate and fish communities

Milošević, Đurađ; Stojković Piperac, Milica; Petrović, Ana; Čerba, Dubravka; Mančev, Dejan; Paunović, Momir; Simić, Vladica

(2017)

TY  - JOUR
AU  - Milošević, Đurađ
AU  - Stojković Piperac, Milica
AU  - Petrović, Ana
AU  - Čerba, Dubravka
AU  - Mančev, Dejan
AU  - Paunović, Momir
AU  - Simić, Vladica
PY  - 2017
UR  - https://www.sciencedirect.com/science/article/pii/S1470160X17305010
UR  - http://linkinghub.elsevier.com/retrieve/pii/S1470160X17305010
UR  - https://radar.ibiss.bg.ac.rs/handle/123456789/2897
AB  - Community concordance within aquatic biota could provide useful information for improving the methods used in bioassessment and biodiversity conservation management. The main goal of the study was to investigate the mechanism of community concordance between macroinvertebrates and fish in a single river basin (South Morava river Basin, Serbia). In order to achieve this, a Self organizing map (SOM) ordinated and classified sampling sites based on the community structures of five different taxa groups (macroinveretbrates (MIB), fish (FSH), Chironomidae (CHI), Macroinvertebrates without Chironomidae (MWC) and the Ephemeroptera Plecoptera Trichioptera group (EPT)). SOM also revealed 6 environmental gradients along the groups tested that significantly changed their community structures. Using the results of the SOM analysis as the input, the Mantel test quantified the highest community concordance between FSH and MIB (r = 0.42) followed by FSH and CHI (r = 0.29). The lowest concordance was recorded between FSH and EPT (r = 0.14). The indicator species analysis (IndVal) revealed 39 species to be responsible for the community patterns obtained. The Geo-SOM visualized the spatial distribution of the IndVal taxa, revealing the generators of community concordance. The strength of community concordance depends on the variability of the data on the aquatic biota. Thus, having an appropriate sampling and statistical design as well as high taxonomic resolution, as some of the factors which increase the variability in the data set, could present community concordance between fish and macroinvertebrates in an unbiased way.
T2  - Ecological Indicators
T1  - Community concordance in lotic ecosystems: How to establish unbiased congruence between macroinvertebrate and fish communities
VL  - 83
DO  - 10.1016/j.ecolind.2017.08.024
SP  - 474
EP  - 481
ER  - 
@article{
author = "Milošević, Đurađ and Stojković Piperac, Milica and Petrović, Ana and Čerba, Dubravka and Mančev, Dejan and Paunović, Momir and Simić, Vladica",
year = "2017",
abstract = "Community concordance within aquatic biota could provide useful information for improving the methods used in bioassessment and biodiversity conservation management. The main goal of the study was to investigate the mechanism of community concordance between macroinvertebrates and fish in a single river basin (South Morava river Basin, Serbia). In order to achieve this, a Self organizing map (SOM) ordinated and classified sampling sites based on the community structures of five different taxa groups (macroinveretbrates (MIB), fish (FSH), Chironomidae (CHI), Macroinvertebrates without Chironomidae (MWC) and the Ephemeroptera Plecoptera Trichioptera group (EPT)). SOM also revealed 6 environmental gradients along the groups tested that significantly changed their community structures. Using the results of the SOM analysis as the input, the Mantel test quantified the highest community concordance between FSH and MIB (r = 0.42) followed by FSH and CHI (r = 0.29). The lowest concordance was recorded between FSH and EPT (r = 0.14). The indicator species analysis (IndVal) revealed 39 species to be responsible for the community patterns obtained. The Geo-SOM visualized the spatial distribution of the IndVal taxa, revealing the generators of community concordance. The strength of community concordance depends on the variability of the data on the aquatic biota. Thus, having an appropriate sampling and statistical design as well as high taxonomic resolution, as some of the factors which increase the variability in the data set, could present community concordance between fish and macroinvertebrates in an unbiased way.",
journal = "Ecological Indicators",
title = "Community concordance in lotic ecosystems: How to establish unbiased congruence between macroinvertebrate and fish communities",
volume = "83",
doi = "10.1016/j.ecolind.2017.08.024",
pages = "474-481"
}
Milošević, Đ., Stojković Piperac, M., Petrović, A., Čerba, D., Mančev, D., Paunović, M.,& Simić, V.. (2017). Community concordance in lotic ecosystems: How to establish unbiased congruence between macroinvertebrate and fish communities. in Ecological Indicators, 83, 474-481.
https://doi.org/10.1016/j.ecolind.2017.08.024
Milošević Đ, Stojković Piperac M, Petrović A, Čerba D, Mančev D, Paunović M, Simić V. Community concordance in lotic ecosystems: How to establish unbiased congruence between macroinvertebrate and fish communities. in Ecological Indicators. 2017;83:474-481.
doi:10.1016/j.ecolind.2017.08.024 .
Milošević, Đurađ, Stojković Piperac, Milica, Petrović, Ana, Čerba, Dubravka, Mančev, Dejan, Paunović, Momir, Simić, Vladica, "Community concordance in lotic ecosystems: How to establish unbiased congruence between macroinvertebrate and fish communities" in Ecological Indicators, 83 (2017):474-481,
https://doi.org/10.1016/j.ecolind.2017.08.024 . .
5
1
5

Artificial neural networks as an indicator search engine: The visualization of natural and man-caused taxa variability

Milošević, Djuradj; Čerba, Dubravka; Szekeres, József; Csányi, Bela; Tubić, Bojana; Simić, Vladica; Paunović, Momir

(Elsevier, 2016)

TY  - JOUR
AU  - Milošević, Djuradj
AU  - Čerba, Dubravka
AU  - Szekeres, József
AU  - Csányi, Bela
AU  - Tubić, Bojana
AU  - Simić, Vladica
AU  - Paunović, Momir
PY  - 2016
UR  - http://www.sciencedirect.com/science/article/pii/S1470160X15005646
UR  - http://www.scopus.com/inward/record.url?eid=2-s2.0-84949724540&partnerID=tZOtx3y1
UR  - https://radar.ibiss.bg.ac.rs/handle/123456789/3542
AB  - One of the main challenges in selecting suitable biological indicators of environmental degradation is to recognize the stressor-specific response signal and to separate it from the natural background variability, which can be accomplished by setting an appropriate statistical design, with an output that enables understanding of the recorded indicator signal. In this study we used artificial neural networks (self organizing map (SOM) and geo-self-organizing map (Geo-SOM)) to model and visualize the variability in the chironomid community of the Danube basin, as a model for large non-wadeable rivers. Geo-SOM analysis visualized the longitudinal distribution of significant parameters defining different spatial-distributional types of anthropogenic disturbance. Chironomidae larvae, sampled in both shallow (river bank) and deep (middle) parts of the river, emphasized hydromorphological degradation and zinc as the most important stressing factors, with chlorophyll-a and suspended solids as accompanying variables influencing the community structure. Substrate specificity was shown to be a relevant factor influencing the variability within chironomid community structure bound to natural causes. Geo-SOM analysis also visualized the longitudinal distribution of chironomid taxa, following the distribution patterns of significant disturbance factors. The Kruskal–Wallis test validated 25 potential indicators for the shore area and 11 for the deep water area, which significantly changed their frequencies and abundances between classes with different extents of degradation. Due to its high taxonomical and ecological diversity, the Chironomidae family is a significant source of potential stress-specific indicators, which should be recognized and included in the future in relevant bioassessment methods. The artificial neural network could be a powerful tool for selecting reliable indicators to explain the variability found in the ecosystem and enable it to be specified and patterned together with environmental degradation.
PB  - Elsevier
T2  - Ecological Indicators
T1  - Artificial neural networks as an indicator search engine: The visualization of natural and man-caused taxa variability
VL  - 61
DO  - 10.1016/j.ecolind.2015.10.029
SP  - 777
EP  - 789
ER  - 
@article{
author = "Milošević, Djuradj and Čerba, Dubravka and Szekeres, József and Csányi, Bela and Tubić, Bojana and Simić, Vladica and Paunović, Momir",
year = "2016",
abstract = "One of the main challenges in selecting suitable biological indicators of environmental degradation is to recognize the stressor-specific response signal and to separate it from the natural background variability, which can be accomplished by setting an appropriate statistical design, with an output that enables understanding of the recorded indicator signal. In this study we used artificial neural networks (self organizing map (SOM) and geo-self-organizing map (Geo-SOM)) to model and visualize the variability in the chironomid community of the Danube basin, as a model for large non-wadeable rivers. Geo-SOM analysis visualized the longitudinal distribution of significant parameters defining different spatial-distributional types of anthropogenic disturbance. Chironomidae larvae, sampled in both shallow (river bank) and deep (middle) parts of the river, emphasized hydromorphological degradation and zinc as the most important stressing factors, with chlorophyll-a and suspended solids as accompanying variables influencing the community structure. Substrate specificity was shown to be a relevant factor influencing the variability within chironomid community structure bound to natural causes. Geo-SOM analysis also visualized the longitudinal distribution of chironomid taxa, following the distribution patterns of significant disturbance factors. The Kruskal–Wallis test validated 25 potential indicators for the shore area and 11 for the deep water area, which significantly changed their frequencies and abundances between classes with different extents of degradation. Due to its high taxonomical and ecological diversity, the Chironomidae family is a significant source of potential stress-specific indicators, which should be recognized and included in the future in relevant bioassessment methods. The artificial neural network could be a powerful tool for selecting reliable indicators to explain the variability found in the ecosystem and enable it to be specified and patterned together with environmental degradation.",
publisher = "Elsevier",
journal = "Ecological Indicators",
title = "Artificial neural networks as an indicator search engine: The visualization of natural and man-caused taxa variability",
volume = "61",
doi = "10.1016/j.ecolind.2015.10.029",
pages = "777-789"
}
Milošević, D., Čerba, D., Szekeres, J., Csányi, B., Tubić, B., Simić, V.,& Paunović, M.. (2016). Artificial neural networks as an indicator search engine: The visualization of natural and man-caused taxa variability. in Ecological Indicators
Elsevier., 61, 777-789.
https://doi.org/10.1016/j.ecolind.2015.10.029
Milošević D, Čerba D, Szekeres J, Csányi B, Tubić B, Simić V, Paunović M. Artificial neural networks as an indicator search engine: The visualization of natural and man-caused taxa variability. in Ecological Indicators. 2016;61:777-789.
doi:10.1016/j.ecolind.2015.10.029 .
Milošević, Djuradj, Čerba, Dubravka, Szekeres, József, Csányi, Bela, Tubić, Bojana, Simić, Vladica, Paunović, Momir, "Artificial neural networks as an indicator search engine: The visualization of natural and man-caused taxa variability" in Ecological Indicators, 61 (2016):777-789,
https://doi.org/10.1016/j.ecolind.2015.10.029 . .
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