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Genetic transformation of Centaury (Centaurium erythraea Rafn.) using AtCKX1 and AtCKX2 genes

dc.contributor.advisorDragićević, Ivana
dc.contributor.advisorSubotić, Angelina
dc.contributor.otherSimonović, Ana
dc.creatorTrifunović-Momčilov, Milana
dc.date.accessioned2017-11-23T08:24:07Z
dc.date.available2017-11-23T08:24:07Z
dc.date.issued2012
dc.identifier.urihttp://eteze.bg.ac.rs/application/showtheses?thesesId=14
dc.identifier.urihttps://fedorabg.bg.ac.rs/fedora/get/o:2091/bdef:Content/download
dc.identifier.urihttp://vbs.rs/scripts/cobiss?command=DISPLAY&base=70036&RID=
dc.identifier.urihttp://nardus.mpn.gov.rs/123456789/2021
dc.identifier.urihttps://radar.ibiss.bg.ac.rs/handle/123456789/2425
dc.description.abstractBiljna vrsta Centaurium erythraea Rafn., u našem narodu poznata kao kičica, od davnina se upotrebljava kao lek za sniženje temperature i nivoa šećera u krvi, lečenje anemije, žutice i gihta, za jačanje apetita i povećanje stomačne sekrecije. Zbog poznatih lekovitih svojstava, kičica se nalazi u mnogim farmakopejama. Kao početni materijal za uspostavljanje kulture korenova in vitro korišćeni su vrhovi adventivnih korenova prosečne dužine ~10 mm koji su izolovani od sterilno dobijenih klijanaca kičice i dalje su gajeni na čvrstoj MS hranljivoj podlozi bez regulatora rastenja. Proces organogeneze u kulturi korenova kičice je spontan. Posle sedam dana gajenja u kulturi na bazalnom delu početnog eksplantata uočavaju se prve promene. Koren zadebljava i tkivo počinje da puca celom dužinom bazalnog dela. Tokom četvoronedeljnog pasaža, duž razraslog dela eksplantata, formira se veliki broj adventivnih pupoljaka. U cilju dobijanja transgenih biljaka sa sniženim nivoom endogenih citokinina, za transformaciju su korišćena dva bakterijska soja Agrobacterium tumefaciens GV3101 koji nose pBinHTX plazmid sa dva različita gena, AtCKX1 odnosno AtCKX2, koji kodiraju enzim citokinin oksidazu/dehidrogenazu (CKX). Efikasna integracija AtCKX1 gena (30% ) i AtCKX2 gena (28.2% ) određena je PCR analizom genomske DNK. U cilju što boljeg određivanja nivoa ekspresije AtCKX gena kičice prvo je bilo neophodno urađena je optimizacija PCR protokola sa prajmerima za qPCR. Ovaj postupak sastojao se u pronalaženju optimalne temperature vezivanja prajmera uz istovremenu primenu različitih aditiva odnosno pojačivača PCR reakcije. Dodavanje 5% DMSO-a u qPCR reakcije značajno je poboljšalo specifičnost amplifikacije AtCKX1 i AtCKX2 gena kičice. qRT-PCR analizom potvrđena je ekspresija AtCKX1 i AtCKX2 gena kod 50% odnosno 64% analiziranih linija. U ovom radu uspešno je pokazano da ekspresija AtCKX gena u transgenim biljkama kičice značajno utiče na metabolizam citokinina. Ključni faktor u kontroli nivoa citokinina u biljnim tkivima predstavlja CKX enzim, jedini do sada poznati enzim koji učestvuje u katabolizmu citokinina. Specifična aktivnost CKX enzima određivana je u izdancima i korenovima svih transgenih AtCKX linija. Analiza količine i sadržaja ukupnih kao i pojedinačnih grupa endogenih citokinina netransfromisanih biljaka kičice omogućila je, po prvi put, određivanje citokiniskog profila kičice in vitro. Takođe je pokazano da se promene u metabolizmu citokinina prilično nepredvidivo odražavaju na količinu auksina tj. količinu ukupne endogene IAA u samom biljnom tkivu. Uspešno je pokazano da ekpresija AtCKX gena takođe utiče i na neke morfološke parametre transformisanih biljaka kičice. Promenjena citokininska homeostaza utiče na smanjenje morfogenetskog potencijala transformisanih biljaka kičice, ali ne utiče na značajno odstupanje prirasta mase izdanaka u odnosu na kontrolu. Rezultati analize fotosintetičkih pigmenata kičice ukazuju na to da sniženje citokinina može biti jedan od preduslova, ali ne i sam signal za početak senescencije. Dominantne farmakološki aktivne supstance kičice su sekoiridoidi i ksantoni. Sadržaj sekoiridoidnih komponenti biljaka in vitro ne razlikuje se mnogo u odnosu na biljke iz prirode dok se količina ksantonskih jedinjenja značajno povećava kod biljaka gajenih in vitro. Većina transgenih AtCKX linija kičice produkuje manje sekoiridoida u odnosu na biljke in vitro i biljke iz prirode. Povećana akumulacija ksantona određena je u skoro svim AtCKX linijama kičice u poređenju sa biljkama iz prirode. Imajući u vidu da su ksantoni sve više u upotrebi zbog svojih farmakoloških svojstava, transgene AtCKX linije kičice mogle bi biti koristan izvor biljnog materijala u proizvodnji novih lekova.sr
dc.description.abstractPlant species Centaurium erythraea Rafn., commonly known as common centaury, has been used for centuries to cure febrile conditions, regulate blood sugar, treat anemia, jaundice and gout and to increase appetite and stimulate digestion. Because of its numerous therapeutic properties centaurii herba is officially recognized as a drug in a number of pharmacopoeias. Root tips of ≈10 mm average length, isolated from seedlings obtained under sterile conditions, were used as initial explants in this work. The in vitro culture of non-transformed centaury roots was established on solid half-strength MS nutrient medium without growth regulators. Organogenesis is a spontaneous process in centaury root culture. The first changes were noticeable on the basal part of the initial explants, after seven days of growth on MS medium. The root explants thickened and began to burst over the entire length of the basal part. During four weeks of subculture, a large number of adventitious buds were observed on initial explants. In order to obtain transgenic centaury plants with lowered endogenous cytokinin levels, in vitro cultivated root explants were transformed with Agrobacterium tumefaciens GV3101 bearing a pBinHTX plasmid with either AtCKX1 or AtCKX2 genes encoding isoforms of cytokinin oxidase/dehydrogenase (CKX). PCR analysis of genomic DNA confirmed the effecient integration of both AtCKX1 (30%) and AtCKX2 (28.2%) genes. In order to investigate the expression of AtCKX genes in transgenic centaury plants, an optimization of PCR protocol with qPCR primers was necessary. Optimization of PCR protocol implicated finding the optimal annealing temperature and simultaneous application of different PCR additives and enhancers. Addition of 5% DMSO significantly improved the specificity of qPCR amplification of AtCKX1 and AtCKX2 genes. qRT-PCR analysis indicated that AtCKX1 and AtCKX2 genes were expressed in 50% and 64% of the analyzed transgenic lines, respectively. In this work we clearly demonstrate a significant effect of AtCKX genes on cytokinin metabolism in transgenic centaury plants. Since CKX is the only known enzyme involved in cytokinin catabolism, it is considered a key factor in controlling the cytokinin levels in plant tissues. CKX enzyme activity was determined in shoots and in roots of all AtCKX transgenic lines. The analysis of the content of total cytokinins and individual groups of endogenous cytokinins in non-transformed centaury plants enabled, for the first time, a determination of cytokinin profile of this species in vitro. In this work we also showed that changes in the cytokinin metabolism have unpredictable effects on the endogenous IAA levels in plant tissues. The expression of AtCKX genes also affected some morphological traits of the transgenic centaury plants. We observed that a decrease of endogenous cytokinins caused a reduction of morphogenetic potential of transgenic centaury plants but did not significantly affect the biomass production in comparison to control plants. Analysis of photosynthetic pigments of centaury indicated that a decrease of endogenous cytokinins might be a prerequisite rather than a signal for the onset of senescence. The main active pharmacological compounds of the centaury are secoiridoids and xanthones. The content of the secoiridoids found in plants grown in vitro was similar to that in plants collected from nature, whereas the quantity of xanthones was significantly elevated in plants grown in vitro, in comparison to plants from nature. Most of the obtained AtCKX transgenic centaury lines produced less secoiridoids than plants from natural habitat or plants grown in vitro. On the contrary, it was determined that the majority of the AtCKX transgenic centaury lines accumulated more xanthones than plants grown in nature. As xanthones are increasingly being used for their pharmacological properties, AtCKX transgenic centaury plants could be used as a useful source of plant material for the production of novel drugs.en
dc.formatapplication/pdf
dc.languagesr
dc.publisherBelgrade: University of Belgrade, Faculty of Biology
dc.rightsopenAccess
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.sourceUniversity of Belgrade, Faculty of Biologysr
dc.subjectCentaurium erythraea Rafn.
dc.subjectAgrobacterium tumefaciens
dc.subjectGenetička transformacijasr
dc.subjectqRT-PCR
dc.subjectAtCKX genisr
dc.subjectCKX aktivnostsr
dc.subjectCitokininisr
dc.subjectSekundarni metabolitisr
dc.subjectSekoiridoidisr
dc.subjectKsantonisr
dc.subjectGenetic transformationen
dc.subjectAtCKX genesen
dc.subjectCKX activityen
dc.subjectCytokininsen
dc.subjectSecondary metabolitesen
dc.subjectSecoiridoidsen
dc.subjectXanthonesen
dc.titleGenetička transformacija kičice (Centaurium erythraea Rafn.) AtCKX1 i AtCKX2 genimasr
dc.titleGenetic transformation of Centaury (Centaurium erythraea Rafn.) using AtCKX1 and AtCKX2 genesen
dc.typedoctoralThesis
dc.rights.licenseBY
dcterms.abstractСуботић, Aнгелина; Драгићевић, Ивана; Симоновић, Aна; Трифуновић-Момчилов, Милана;
dc.citation.apaTrifunović, M. (2012). Genetička transformacija kičice (Centaurium erythraea Rafn.) AtCKX1 i AtCKX2 genima. University of Belgrade, Faculty of Biology. p. 177.
dc.citation.vancouverTrifunović M. Genetička transformacija kičice (Centaurium erythraea Rafn.) AtCKX1 i AtCKX2 genima [#dissertation]. Belgrade: University of Belgrade, Faculty of Biology; 2012. 177 p.
dc.citation.spage1
dc.citation.epage177
dc.type.versionpublishedVersionen
dc.identifier.fulltexthttps://radar.ibiss.bg.ac.rs//bitstream/id/248/Trifunovic_Milana_dissertation.pdf
dc.identifier.rcubhttps://hdl.handle.net/21.15107/rcub_nardus_2021


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