Živić, Miroslav

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  • Živić, Miroslav (2)
  • Zivic, Miroslav (1)
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Third harmonic generation imaging of live fungal cells – quantifying lipid droplets dynamics during nitrogen starvation

Pajić, Tanja; Todorović, Nataša; Živić, Miroslav; Nikolić, Stanko N; Rabasović, Mihailo D; Clayton, Andrew HA; Krmpot, Aleksandar J

(European Society for Molecular Imaging, 2023)

TY  - CONF
AU  - Pajić, Tanja
AU  - Todorović, Nataša
AU  - Živić, Miroslav
AU  - Nikolić, Stanko N
AU  - Rabasović, Mihailo D
AU  - Clayton, Andrew HA
AU  - Krmpot, Aleksandar J
PY  - 2023
UR  - https://www.eventclass.org/contxt_emim2023/online-program/session?s=PW36#e609
UR  - http://radar.ibiss.bg.ac.rs/handle/123456789/6288
AB  - Introduction
Studies of lipid droplet (LD) physiology in fungi are still in their infancy but their quantitation
has relevance to issues in biomedicine, agriculture and industrial waste. Third Harmonic
Generation (THG) microscopy is non-invasive, produces inherently confocal images and
doesn’t require fixation or external labeling, which make it suitable for in vivo LD imaging [1,
2]. We present in vivo and label-free imaging of LD in individual fungal cells by THG
microscopy to assess the effects of nitrogen starvation. The LD quantification was performed
by two image analysis techniques.
Methods
THG microscopy was applied for the first time to a filamentous fungus and our choice was the
oleaginous fungus Phycomyces blakesleeanus. To observe the changes in LD number, the
22h old hyphae culture was divided into control and nitrogen starved groups (N-starved). A
home built nonlienar microscope with Yb:KGW laser at 1040 nm (200 fs pulses, 83 MHz
repetition rate) was used for THG imaging of live unstained hyphae [3]. THG signal was
detected by PMT in the transmission arm after passing through a Hoya glass UV filter with the
peak at 340 nm. 2D THG images of LDs (Fig. 1a) were analyzed by Image Correlation
Spectroscopy (ICS) measuring spatially-correlated fluctuations [4] and software particle
counting – Particle Size Analysis (PSA).
Results/Discussion
The small volume of hyphae suspension was placed between two coverslips of 170 μm
thickness in order to meet the criteria for the best numerical aperture of the objective lens and
for better transmission of THG signal. The high resolution of the microscopic system, the
hyphae thickness (ca 10 μm) and medium transparency made it possible for the whole
hyphae to be optically sectioned and a 3D model to be reconstructed (Fig. 1b and video).
Since ICS was primarily developed for fluorescent images and was not used to analyze THG
images, we have tested it by comparing the results to the PSA. Nitrogen starvation as
expected [5] increased LD number compared to control which was confirmed by both methods and obtained results are in good agreement. The overall increase of LDs during
growth without available nitrogen is found to be between 3 and 4.5 h time point, followed with
the loss of population of larger-than-average LDs during prolonged starvation.
Conclusions
THG microscopy is suitable for imaging and quantification of changes in lipid droplet number,
brought upon by complete removal of nitrogen, from such low density/diameter baseline. In
addition, we demonstrate that the ICA is suitable for THG images, although it is primarily
developed and have been mostly used for fluorescence signals so far.
PB  - European Society for Molecular Imaging
C3  - European Molecular Imaging Meeting: 18th Annual Meeting of the European Society for Molecular Imaging: EMIM 2023; 2023 Mar 14-17; Saltzburg, Austria
T1  - Third harmonic generation imaging of live fungal cells – quantifying lipid droplets dynamics during nitrogen starvation
SP  - 1093
UR  - https://hdl.handle.net/21.15107/rcub_ibiss_6288
ER  - 
@conference{
author = "Pajić, Tanja and Todorović, Nataša and Živić, Miroslav and Nikolić, Stanko N and Rabasović, Mihailo D and Clayton, Andrew HA and Krmpot, Aleksandar J",
year = "2023",
abstract = "Introduction
Studies of lipid droplet (LD) physiology in fungi are still in their infancy but their quantitation
has relevance to issues in biomedicine, agriculture and industrial waste. Third Harmonic
Generation (THG) microscopy is non-invasive, produces inherently confocal images and
doesn’t require fixation or external labeling, which make it suitable for in vivo LD imaging [1,
2]. We present in vivo and label-free imaging of LD in individual fungal cells by THG
microscopy to assess the effects of nitrogen starvation. The LD quantification was performed
by two image analysis techniques.
Methods
THG microscopy was applied for the first time to a filamentous fungus and our choice was the
oleaginous fungus Phycomyces blakesleeanus. To observe the changes in LD number, the
22h old hyphae culture was divided into control and nitrogen starved groups (N-starved). A
home built nonlienar microscope with Yb:KGW laser at 1040 nm (200 fs pulses, 83 MHz
repetition rate) was used for THG imaging of live unstained hyphae [3]. THG signal was
detected by PMT in the transmission arm after passing through a Hoya glass UV filter with the
peak at 340 nm. 2D THG images of LDs (Fig. 1a) were analyzed by Image Correlation
Spectroscopy (ICS) measuring spatially-correlated fluctuations [4] and software particle
counting – Particle Size Analysis (PSA).
Results/Discussion
The small volume of hyphae suspension was placed between two coverslips of 170 μm
thickness in order to meet the criteria for the best numerical aperture of the objective lens and
for better transmission of THG signal. The high resolution of the microscopic system, the
hyphae thickness (ca 10 μm) and medium transparency made it possible for the whole
hyphae to be optically sectioned and a 3D model to be reconstructed (Fig. 1b and video).
Since ICS was primarily developed for fluorescent images and was not used to analyze THG
images, we have tested it by comparing the results to the PSA. Nitrogen starvation as
expected [5] increased LD number compared to control which was confirmed by both methods and obtained results are in good agreement. The overall increase of LDs during
growth without available nitrogen is found to be between 3 and 4.5 h time point, followed with
the loss of population of larger-than-average LDs during prolonged starvation.
Conclusions
THG microscopy is suitable for imaging and quantification of changes in lipid droplet number,
brought upon by complete removal of nitrogen, from such low density/diameter baseline. In
addition, we demonstrate that the ICA is suitable for THG images, although it is primarily
developed and have been mostly used for fluorescence signals so far.",
publisher = "European Society for Molecular Imaging",
journal = "European Molecular Imaging Meeting: 18th Annual Meeting of the European Society for Molecular Imaging: EMIM 2023; 2023 Mar 14-17; Saltzburg, Austria",
title = "Third harmonic generation imaging of live fungal cells – quantifying lipid droplets dynamics during nitrogen starvation",
pages = "1093",
url = "https://hdl.handle.net/21.15107/rcub_ibiss_6288"
}
Pajić, T., Todorović, N., Živić, M., Nikolić, S. N., Rabasović, M. D., Clayton, A. H.,& Krmpot, A. J.. (2023). Third harmonic generation imaging of live fungal cells – quantifying lipid droplets dynamics during nitrogen starvation. in European Molecular Imaging Meeting: 18th Annual Meeting of the European Society for Molecular Imaging: EMIM 2023; 2023 Mar 14-17; Saltzburg, Austria
European Society for Molecular Imaging., 1093.
https://hdl.handle.net/21.15107/rcub_ibiss_6288
Pajić T, Todorović N, Živić M, Nikolić SN, Rabasović MD, Clayton AH, Krmpot AJ. Third harmonic generation imaging of live fungal cells – quantifying lipid droplets dynamics during nitrogen starvation. in European Molecular Imaging Meeting: 18th Annual Meeting of the European Society for Molecular Imaging: EMIM 2023; 2023 Mar 14-17; Saltzburg, Austria. 2023;:1093.
https://hdl.handle.net/21.15107/rcub_ibiss_6288 .
Pajić, Tanja, Todorović, Nataša, Živić, Miroslav, Nikolić, Stanko N, Rabasović, Mihailo D, Clayton, Andrew HA, Krmpot, Aleksandar J, "Third harmonic generation imaging of live fungal cells – quantifying lipid droplets dynamics during nitrogen starvation" in European Molecular Imaging Meeting: 18th Annual Meeting of the European Society for Molecular Imaging: EMIM 2023; 2023 Mar 14-17; Saltzburg, Austria (2023):1093,
https://hdl.handle.net/21.15107/rcub_ibiss_6288 .

In vivo multiphoton imaging of a filamentous fungus Phycomyces blakesleeanus: the effect of small ambient temperature increase on mitochondrial morphology and lipid droplets density

Pajić, Tanja; Kozakijević, Suzana; Krmpot, Aleksandar J.; Živić, Miroslav; Todorović, Nataša; Rabasović, Mihailo D.

(Belgrade: Vinča Institute of Nuclear Sciences – National Institute of the Republic of Serbia, University of Belgrade, 2023)

TY  - CONF
AU  - Pajić, Tanja
AU  - Kozakijević, Suzana
AU  - Krmpot, Aleksandar J.
AU  - Živić, Miroslav
AU  - Todorović, Nataša
AU  - Rabasović, Mihailo D.
PY  - 2023
UR  - http://radar.ibiss.bg.ac.rs/handle/123456789/6249
AB  - Mitochondrial function, and consequently cellular metabolic status and fitness of a cell, is tightly linked
to the dynamic changes of mitochondrial morphology, including mitochondrial fusion, fission and
mitophagy [1]. Lipid droplets (LDs) can be in close contact with mitochondria, and accumulate
autophagy or mitophagy generated material during the reparatory processes [2]. The effect of increased
ambient temperature on mitochondrial morphology and LDs density in living cells of the filamentous
fungus Phycomyces blakesleeanus was investigated. For in vivo imaging of mitochondria and LDs
multiphoton microscopy was used. Multiphoton microscopy enables 3D imaging in high resolution and
reduced photodamage and photobleaching of the sample using IR ultrafast pulsed lasers. Mitochondria
were stained with the vital dye Rhodamine123 (Rh123) which enters these organelles based on their
membrane potential - mitochondria must be healthy/active to stain. A wavelength of 800 nm from Ti:Sa
laser (160 fs pulse duration, 76 MHz repetition rate) was used for two-photon excitation of Rh123. The
laser beam was focused by the Zeiss Plan Neofluar 40x1.3 objective lens and the signal was detected
through a bandpass interference filter MF530/43 (ThorLabs, USA). For LDs staining a Nile Red dye
was used and excited by Yb: KGW laser at 1040 nm [3]. Six morphological types of mitochondria were
observed in the hyphae of this fungus: intermediate type - normal, intermediate with small semicircular
tubules, tubular, elongated tubular, fragmented (small ellipsoid tubule) and fragmented with exclusively
spheroid-shaped mitochondria. Changes in mitochondrial morphology were induced by a small
temperature change. A 3°C increase in ambient temperature, from 22°C, had a dramatic effect on
mitochondrial morphology, inducing the appearance of a predominantly tubular mitochondrial
morphology. The total area percentage of mitochondria showed an increasing trend when grown at
25°C. Increasing the ambient temperature to 25°C induced a statistically significant increase in the
percentage of hyphal area occupied by LDs from 2.9 ± 1.6 to 4.7 ± 2.2 (mean value and SD in percentage
of hyphal area). The observed response to the small temperature increase points to the physiological
adaptation of hyphal metabolism.
PB  - Belgrade: Vinča Institute of Nuclear Sciences – National Institute of the Republic of Serbia, University of Belgrade
C3  - Book of abstracts: 9th International School and Conference on Photonics PHOTONICA 2023 with joint events: Understanding interaction light - biological surfaces possibility for new electronic materials and devices and Biological and bioinspired structures for multispectral surveillance and Quantum sensing integration within microfluidic Lab-on-a Chips for biomedical applications; 2023 Aug 28 - Sep 01; Belgrade, Serbia
T1  - In vivo multiphoton imaging of a filamentous fungus Phycomyces blakesleeanus: the effect of small ambient temperature increase on mitochondrial morphology and lipid droplets density
SP  - 84
UR  - https://hdl.handle.net/21.15107/rcub_ibiss_6249
ER  - 
@conference{
author = "Pajić, Tanja and Kozakijević, Suzana and Krmpot, Aleksandar J. and Živić, Miroslav and Todorović, Nataša and Rabasović, Mihailo D.",
year = "2023",
abstract = "Mitochondrial function, and consequently cellular metabolic status and fitness of a cell, is tightly linked
to the dynamic changes of mitochondrial morphology, including mitochondrial fusion, fission and
mitophagy [1]. Lipid droplets (LDs) can be in close contact with mitochondria, and accumulate
autophagy or mitophagy generated material during the reparatory processes [2]. The effect of increased
ambient temperature on mitochondrial morphology and LDs density in living cells of the filamentous
fungus Phycomyces blakesleeanus was investigated. For in vivo imaging of mitochondria and LDs
multiphoton microscopy was used. Multiphoton microscopy enables 3D imaging in high resolution and
reduced photodamage and photobleaching of the sample using IR ultrafast pulsed lasers. Mitochondria
were stained with the vital dye Rhodamine123 (Rh123) which enters these organelles based on their
membrane potential - mitochondria must be healthy/active to stain. A wavelength of 800 nm from Ti:Sa
laser (160 fs pulse duration, 76 MHz repetition rate) was used for two-photon excitation of Rh123. The
laser beam was focused by the Zeiss Plan Neofluar 40x1.3 objective lens and the signal was detected
through a bandpass interference filter MF530/43 (ThorLabs, USA). For LDs staining a Nile Red dye
was used and excited by Yb: KGW laser at 1040 nm [3]. Six morphological types of mitochondria were
observed in the hyphae of this fungus: intermediate type - normal, intermediate with small semicircular
tubules, tubular, elongated tubular, fragmented (small ellipsoid tubule) and fragmented with exclusively
spheroid-shaped mitochondria. Changes in mitochondrial morphology were induced by a small
temperature change. A 3°C increase in ambient temperature, from 22°C, had a dramatic effect on
mitochondrial morphology, inducing the appearance of a predominantly tubular mitochondrial
morphology. The total area percentage of mitochondria showed an increasing trend when grown at
25°C. Increasing the ambient temperature to 25°C induced a statistically significant increase in the
percentage of hyphal area occupied by LDs from 2.9 ± 1.6 to 4.7 ± 2.2 (mean value and SD in percentage
of hyphal area). The observed response to the small temperature increase points to the physiological
adaptation of hyphal metabolism.",
publisher = "Belgrade: Vinča Institute of Nuclear Sciences – National Institute of the Republic of Serbia, University of Belgrade",
journal = "Book of abstracts: 9th International School and Conference on Photonics PHOTONICA 2023 with joint events: Understanding interaction light - biological surfaces possibility for new electronic materials and devices and Biological and bioinspired structures for multispectral surveillance and Quantum sensing integration within microfluidic Lab-on-a Chips for biomedical applications; 2023 Aug 28 - Sep 01; Belgrade, Serbia",
title = "In vivo multiphoton imaging of a filamentous fungus Phycomyces blakesleeanus: the effect of small ambient temperature increase on mitochondrial morphology and lipid droplets density",
pages = "84",
url = "https://hdl.handle.net/21.15107/rcub_ibiss_6249"
}
Pajić, T., Kozakijević, S., Krmpot, A. J., Živić, M., Todorović, N.,& Rabasović, M. D.. (2023). In vivo multiphoton imaging of a filamentous fungus Phycomyces blakesleeanus: the effect of small ambient temperature increase on mitochondrial morphology and lipid droplets density. in Book of abstracts: 9th International School and Conference on Photonics PHOTONICA 2023 with joint events: Understanding interaction light - biological surfaces possibility for new electronic materials and devices and Biological and bioinspired structures for multispectral surveillance and Quantum sensing integration within microfluidic Lab-on-a Chips for biomedical applications; 2023 Aug 28 - Sep 01; Belgrade, Serbia
Belgrade: Vinča Institute of Nuclear Sciences – National Institute of the Republic of Serbia, University of Belgrade., 84.
https://hdl.handle.net/21.15107/rcub_ibiss_6249
Pajić T, Kozakijević S, Krmpot AJ, Živić M, Todorović N, Rabasović MD. In vivo multiphoton imaging of a filamentous fungus Phycomyces blakesleeanus: the effect of small ambient temperature increase on mitochondrial morphology and lipid droplets density. in Book of abstracts: 9th International School and Conference on Photonics PHOTONICA 2023 with joint events: Understanding interaction light - biological surfaces possibility for new electronic materials and devices and Biological and bioinspired structures for multispectral surveillance and Quantum sensing integration within microfluidic Lab-on-a Chips for biomedical applications; 2023 Aug 28 - Sep 01; Belgrade, Serbia. 2023;:84.
https://hdl.handle.net/21.15107/rcub_ibiss_6249 .
Pajić, Tanja, Kozakijević, Suzana, Krmpot, Aleksandar J., Živić, Miroslav, Todorović, Nataša, Rabasović, Mihailo D., "In vivo multiphoton imaging of a filamentous fungus Phycomyces blakesleeanus: the effect of small ambient temperature increase on mitochondrial morphology and lipid droplets density" in Book of abstracts: 9th International School and Conference on Photonics PHOTONICA 2023 with joint events: Understanding interaction light - biological surfaces possibility for new electronic materials and devices and Biological and bioinspired structures for multispectral surveillance and Quantum sensing integration within microfluidic Lab-on-a Chips for biomedical applications; 2023 Aug 28 - Sep 01; Belgrade, Serbia (2023):84,
https://hdl.handle.net/21.15107/rcub_ibiss_6249 .

Osmotic swelling activates a novel anionic current with VRAC-like properties in a cytoplasmic droplet membrane from Phycomyces blakesleeanus sporangiophores

Krizak, Strahinja; Nikoic, Ljiljana; Stanic, Marina; Zizic, Milan; Zakrzewska, Joanna; Zivic, Miroslav; Todorović, Nataša

(2015)

TY  - JOUR
AU  - Krizak, Strahinja
AU  - Nikoic, Ljiljana
AU  - Stanic, Marina
AU  - Zizic, Milan
AU  - Zakrzewska, Joanna
AU  - Zivic, Miroslav
AU  - Todorović, Nataša
PY  - 2015
UR  - https://radar.ibiss.bg.ac.rs/handle/123456789/1977
AB  - We describe here whole-cell currents of droplets prepared from the
   apical region of growing Phycomyces blakesleeanus sporangiophores.
   Whole-cell current recordings revealed the osmotically activated,
   outwardly rectifying, fast inactivating instantaneous current (ORIC)
   with biophysical properties closely resembling volume-regulated anionic
   current (VRAC). ORIC is activated under conditions of osmotically
   induced swelling and shows strong selectivity for anions over cations.
   In addition, ORIC shows voltage and time-dependent inactivation at
   positive potentials and recovery from inactivation at negative
   potentials. ORIC is blocked by anthracene-9-carboxylic acid, an anion
   channel blocker, in a voltage-dependent manner. This is the first report
   of the presence of VRAC-like current in an organism outside the chordate
   lineage. (C) 2015 Institut Pasteur. Published by Elsevier Masson SAS.
   All rights reserved.
T2  - Research in Microbiology
T1  - Osmotic swelling activates a novel anionic current with VRAC-like
 properties in a cytoplasmic droplet membrane from Phycomyces
 blakesleeanus sporangiophores
IS  - 3
VL  - 166
DO  - 10.1016/j.resmic.2015.02.004
SP  - 162
EP  - 173
ER  - 
@article{
author = "Krizak, Strahinja and Nikoic, Ljiljana and Stanic, Marina and Zizic, Milan and Zakrzewska, Joanna and Zivic, Miroslav and Todorović, Nataša",
year = "2015",
abstract = "We describe here whole-cell currents of droplets prepared from the
   apical region of growing Phycomyces blakesleeanus sporangiophores.
   Whole-cell current recordings revealed the osmotically activated,
   outwardly rectifying, fast inactivating instantaneous current (ORIC)
   with biophysical properties closely resembling volume-regulated anionic
   current (VRAC). ORIC is activated under conditions of osmotically
   induced swelling and shows strong selectivity for anions over cations.
   In addition, ORIC shows voltage and time-dependent inactivation at
   positive potentials and recovery from inactivation at negative
   potentials. ORIC is blocked by anthracene-9-carboxylic acid, an anion
   channel blocker, in a voltage-dependent manner. This is the first report
   of the presence of VRAC-like current in an organism outside the chordate
   lineage. (C) 2015 Institut Pasteur. Published by Elsevier Masson SAS.
   All rights reserved.",
journal = "Research in Microbiology",
title = "Osmotic swelling activates a novel anionic current with VRAC-like
 properties in a cytoplasmic droplet membrane from Phycomyces
 blakesleeanus sporangiophores",
number = "3",
volume = "166",
doi = "10.1016/j.resmic.2015.02.004",
pages = "162-173"
}
Krizak, S., Nikoic, L., Stanic, M., Zizic, M., Zakrzewska, J., Zivic, M.,& Todorović, N.. (2015). Osmotic swelling activates a novel anionic current with VRAC-like
 properties in a cytoplasmic droplet membrane from Phycomyces
 blakesleeanus sporangiophores. in Research in Microbiology, 166(3), 162-173.
https://doi.org/10.1016/j.resmic.2015.02.004
Krizak S, Nikoic L, Stanic M, Zizic M, Zakrzewska J, Zivic M, Todorović N. Osmotic swelling activates a novel anionic current with VRAC-like
 properties in a cytoplasmic droplet membrane from Phycomyces
 blakesleeanus sporangiophores. in Research in Microbiology. 2015;166(3):162-173.
doi:10.1016/j.resmic.2015.02.004 .
Krizak, Strahinja, Nikoic, Ljiljana, Stanic, Marina, Zizic, Milan, Zakrzewska, Joanna, Zivic, Miroslav, Todorović, Nataša, "Osmotic swelling activates a novel anionic current with VRAC-like
 properties in a cytoplasmic droplet membrane from Phycomyces
 blakesleeanus sporangiophores" in Research in Microbiology, 166, no. 3 (2015):162-173,
https://doi.org/10.1016/j.resmic.2015.02.004 . .
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